Publications P05 SÖDERBOM

2007

Hinas, A., Reimegård, J., Wagner, E.G.H., Nellen, W., Ambros, V.R. and Söderbom, F. (2007) The small RNA repertoire of Dictyostelium discoideum and its regulation by components of the RNAi pathway. Nucleic Acids Research 35: 6714-6726.

Hinas, A. and Söderbom, F. (2007) Treasure hunt in an amoeba: non-coding RNAs in Dictyostelium discoideum. Current Genetics 51(3), 141-59

2006

Hinas, A., Larsson, P., Avesson, L., Kirsebom, L.A., Virtanen, A. and Söderbom, F. (2006) Identification of the major spliceosomal RNAs in Dictyostelium discoideum reveals developmentally regulated U2 variants and polyadenylated snRNAs. Eukaryotic Cell5(6), 924-934 (Shared first authorship)

Söderbom, F. (2006) Small nucleolar RNAs: identification, structure, and function. In: Nellen, W. and Hammann, C. (Eds) Nucleic Acids and Molecular Biology, vol 17. Small RNAs; Analysis and Regulatory Functions. Springer, Berlin Heidelberg pp 31-56

Popova, B., Kuhlmann, M., Hinas, A., Söderbom, F. and Nellen, W. (2006) HelF, a putative RNA helicase acts as a nuclear suppressor of RNAi but not antisense mediated gene silencing. Nucleic Acids Research 34, 773-784

2005

Kuhlmann, M., Borisova, B.E., Kaller, M., Larsson, P., Stach, D., Na, J., Eichinger, L., Lyko, F., Ambros, V., Söderbom, F., Hammann, C., and Nellen, W. (2005) Silencing of retrotransposons in Dictyostelium by DNA methylation and RNAi. Nucleic Acids Research 33, 6405-6417

Söderbom, F., Svärd, S.G. and Kirsebom, L.A. (2005) RNase E Cleavage in the 5' Leader of a tRNA Precursor. Journal of Molecular Biology 352, 22-27

2001

Anjard, C., Söderbom, F., Fuller, D. and Loomis, W.F. (2001) Requirements for the Adenylyl Cyclase in Devel-opment of Dictyostelium. Development 128, 3649-3654.

1999

Söderbom, F., Anjard, C., Iranfar, Fuller, D. and Loomis, W.F. (1999) An adenylyl cyclase that function during late development of Dictyostelium. Development 126, 5436-5471.

Wang, N., Söderbom, F., Anjard, C., Shaulsky, G. and Loomis, W.F. (1999) SDF-2 induction of terminal differen-tiation in Dictyostelium is mediated by the membrane-spanning sensor kinase DhkA. Mol Cell Biol. 15, 4750-4756.

1998

Söderbom, F., and Loomis (1998) Cell-cell signaling during Dictyostelium development. Trends Microbiol. 6, 402-406.

1997

Söderbom, F., Binnie, U., Masters, M. and Wagner, E.G.H.(1997) Effects of PcnB and RNase E upon the stabil-ity of CopA, the antisense RNA that regulates the copy number of plasmid R1. Mol. Microbiol. 26, 493-504.